RNA_Seq Viewer 1.5.0
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Free Version
Publisher Description
RNA-Seq Viewer is a new mobile application built for iOS to provide biologists a new user experience in interrogating large-scale Next-Generation-Sequencing (NGS) data intuitively on the iPad or iPhone. In its initial release, we focus on the visualization of RNA-Seq data from TCGA (The Cancer Genome Atlas). TCGA is a comprehensive and coordinated effort to accelerate the understanding of the molecular basis of cancer through the utilization of large-scale sequencing NGS platforms. Here, human RefSeq gene coordinates are obtained from NCBI (National Center for Biotechnology Information) and integrated with the RNA-Seq expression information to provide the human cancer cell transcriptome landscapes. Unique features of this bioinformatic mobile APP include: 1. Gene expression information (RPKM value) of individual patient with brief clinical annotation is visualized and displayed on the chromosome landscapes. 2. RNA-Seq data from over 2,500 cancer patients on nine different prevalent cancer types were retrieved from TCGA and available for download. 3. Users can further browse and interrogate differentially expressed genes by zooming into regions of particular interest. 4. Users can mark the interested cancer sample information for subsequent analysis and for sharing with other biomedical researchers. 5. Detailed gene information could be navigated directly from NCBI GenBank database. 6. Users can establish their own NGS RNA-Seq data file (using the user.agv template file) for visualization and interrogation. Future systems biology integration at the single gene level with methylation data, CNV data and miRNA expression data would be anticipated. Any suggestions and comments are welcome, please contact: Dr. Wen-chang Lin -- wenlin@ibms.sinica.edu.tw
Requires iOS 7.1 or later. Compatible with iPhone, iPad, and iPod touch.
About RNA_Seq Viewer
RNA_Seq Viewer is a free app for iOS published in the Kids list of apps, part of Education.
The company that develops RNA_Seq Viewer is WEN-CHANG LIN. The latest version released by its developer is 1.5.0.
To install RNA_Seq Viewer on your iOS device, just click the green Continue To App button above to start the installation process. The app is listed on our website since 2014-10-05 and was downloaded 5 times. We have already checked if the download link is safe, however for your own protection we recommend that you scan the downloaded app with your antivirus. Your antivirus may detect the RNA_Seq Viewer as malware if the download link is broken.
How to install RNA_Seq Viewer on your iOS device:
- Click on the Continue To App button on our website. This will redirect you to the App Store.
- Once the RNA_Seq Viewer is shown in the iTunes listing of your iOS device, you can start its download and installation. Tap on the GET button to the right of the app to start downloading it.
- If you are not logged-in the iOS appstore app, you'll be prompted for your your Apple ID and/or password.
- After RNA_Seq Viewer is downloaded, you'll see an INSTALL button to the right. Tap on it to start the actual installation of the iOS app.
- Once installation is finished you can tap on the OPEN button to start it. Its icon will also be added to your device home screen.
